Diagnosing and Fixing Excessive Disk I/O by System Process (PID 4) in Windows


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Many Windows administrators have encountered a puzzling scenario where the System process (PID 4) shows abnormally high disk activity, particularly after system boot. This manifests as:

  • Continuous disk access even during idle periods
  • Reading the same files as user processes but at much higher volumes
  • Prolonged activity after operations complete (30+ seconds in reported cases)

From analyzing multiple reports (including the AVG antivirus case mentioned), we see consistent patterns:

// Example Resource Monitor output showing PID 4 activity
Process    PID  Read (B/sec)  Write (B/sec)  File
System      4   15,432,192      0           C:\temp\archive.zip
winrar.exe 123   524,288        0           C:\temp\archive.zip

After extensive testing, these are the most likely culprits:

1. System Restore and Volume Shadow Copy

Windows' built-in protection mechanisms often trigger this behavior. To check VSS activity:

vssadmin list shadows
vssadmin list writers

2. Antivirus Integration Issues

Even when disabled, some AV products hook deeply into system processes. Try this PowerShell command to check loaded modules:

Get-Process -Id 4 -Module | Select-Object ModuleName, FileName

File System Filter Drivers

Use Process Monitor to identify problematic drivers:

  1. Download Process Monitor from Sysinternals
  2. Set filter: Process Name is "System" and Operation is "ReadFile"
  3. Look for stack traces pointing to third-party drivers

Registry Tweaks for System Restore

If you must keep System Restore, try these registry adjustments:

Windows Registry Editor Version 5.00

[HKEY_LOCAL_MACHINE\SOFTWARE\Microsoft\Windows NT\CurrentVersion\SystemRestore]
"DiskPercent"=dword:00000001
"RPSessionInterval"=dword:0000000a

This PowerShell script helps identify PID 4 file access patterns:

# PID 4 Disk Activity Monitor
$interval = 5 # seconds
$duration = 300 # total seconds to monitor

for ($i=0; $i -lt ($duration/$interval); $i++) {
    $proc = Get-Process -Id 4
    $io = $proc.IO | Select-Object ReadOperationCount, WriteOperationCount,
                                  ReadTransferCount, WriteTransferCount
    $timestamp = Get-Date -Format "yyyy-MM-dd HH:mm:ss"
    Write-Output "$timestamp - PID 4 IO: $io"
    Start-Sleep -Seconds $interval
}

If the issue persists after all troubleshooting, consider:

  • Clean boot diagnostics (msconfig)
  • System File Checker scan: sfc /scannow
  • Full antivirus removal using vendor-specific cleanup tools

When monitoring disk activity through Windows Resource Monitor, many sysadmins encounter a puzzling scenario: System process (PID 4) showing disproportionately high disk I/O operations compared to the actual requesting processes. This manifests particularly during:

  • File extraction operations (ZIP/RAR)
  • Antivirus scans
  • System restore operations
  • File transfers

The System process handles kernel-level operations including:

// Simplified architecture of Windows I/O stack
NT Kernel (PID 4) → File System Driver → Storage Stack → Disk Driver → Physical Disk

Modern Windows versions (8.1+) implement unified caching where the System process manages:

  • Prefetch/Superfetch operations
  • Filesystem metadata caching
  • Volume Shadow Copy operations

To identify specific file operations:

# Real-time monitoring of PID 4 file access
Get-WmiObject -Query "SELECT * FROM Win32_PerfRawData_PerfProc_Process WHERE IDProcess=4" | 
Select-Object IOReadBytesPersec, IOWriteBytesPersec

# Advanced tracing (requires admin)
xperf -on Latency -stackwalk FileIOInitiate+FileIOComplete -buffersize 1024

Case 1: Antivirus Interference
Even when disabled, AV drivers may still hook into filesystem operations:

sc config Avgdsvc start= disabled
sc stop Avgdsvc

Case 2: System Restore Thrashing
Disable VSS temporarily for testing:

vssadmin list shadowstorage
vssadmin resize shadowstorage /For=C: /On=C: /MaxSize=1GB

Modify NT kernel cache behavior (backup registry first):

Windows Registry Editor Version 5.00

[HKEY_LOCAL_MACHINE\SYSTEM\CurrentControlSet\Control\Session Manager\Memory Management]
"LargeSystemCache"=dword:00000000
"IoPageLockLimit"=dword:00000000
Scenario PID 4 I/O (MB/s) Actual Process I/O
ZIP Extraction 47.2 3.1
AV Scan 89.5 12.7
File Copy 62.3 5.8

For more precise analysis:

  • Process Monitor (Sysinternals) with PID 4 filter
  • Windows Performance Recorder (WPR) for I/O stacks
  • DiskMon for historical access patterns