Analyzing and Troubleshooting Fluctuating Pending/Uncorrectable Sectors in Seagate HDDs: A Developer’s Guide to SMART Monitoring


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The case of fluctuating Current_Pending_Sector and Offline_Uncorrectable counts in our Seagate ST3000DM001 drive presents an interesting storage reliability scenario. The SMART logs show a peculiar pattern where these values first increased in increments of 8 (from 8 to 32 over several days) before decreasing back to 0 without any sector reallocation.

// Sample SMART monitoring script snippet
#!/bin/bash
while true; do
    smartctl -a /dev/sdb | grep -E "Current_Pending_Sector|Offline_Uncorrectable"
    sleep 3600  # Check hourly
done

Several technical factors could explain this behavior:

  • Marginal Sectors: Weak sectors that intermittently fail but later pass verification
  • Thermal Effects: Temperature variations affecting magnetic alignment
  • Firmware Behavior: The drive's internal error recovery mechanisms

For developers building storage monitoring systems, consider implementing these checks:

# Python SMART monitoring example
import subprocess
import time

def check_smart_health(device):
    cmd = f"smartctl -a {device}"
    result = subprocess.run(cmd.split(), capture_output=True, text=True)
    return "SMART overall-health self-assessment test result: PASSED" in result.stdout

while True:
    if not check_smart_health("/dev/sdb"):
        alert_team()
    time.sleep(21600)  # Check every 6 hours

Our case eventually developed into actual sector reallocation and test failures months later. This demonstrates that while temporary fluctuations might occur, they often serve as early warnings. Developers should:

  • Implement automated alerts for any pending sector count > 0
  • Schedule regular extended SMART tests (weekly for critical systems)
  • Monitor trends rather than single data points

For thorough analysis, use these commands:

# Full SMART attributes
smartctl -a /dev/sdX

# Run short self-test
smartctl -t short /dev/sdX

# Check test results
smartctl -l selftest /dev/sdX

# Check error log
smartctl -l error /dev/sdX

The key takeaway is that SMART attribute fluctuations warrant close monitoring, even if values temporarily return to normal. Implementing robust monitoring can prevent data loss by detecting early signs of disk failure.


When my monitoring system first alerted me about increasing pending sectors on a ST3000DM001 drive, I initially suspected imminent failure. However, the subsequent decrease to zero presented an intriguing technical puzzle:

// Sample SMART monitoring log pattern observed
Jul  6 → 8 pending sectors
Jul  7 → 16 pending sectors (+8)
Jul 11 → 32 pending sectors (+16)
Jul 13 → 0 pending sectors (complete reset)

Key attributes involved in this scenario:

  • Current_Pending_Sector (197): Sectors the drive can't read but hasn't yet determined as bad
  • Offline_Uncorrectable (198): Sectors that failed during offline testing
  • Reallocated_Sector_Ct (5): Count of remapped sectors (remained 0 in this case)

Through testing similar drives, I've identified several potential explanations:

# Diagnostic commands worth running
smartctl -t long /dev/sdb  # Run extended self-test
smartctl -l error /dev/sdb # Check error logs
hdparm --read-sector [sector_num] /dev/sdb # Test specific sectors

The most likely scenario involves marginal sectors that temporarily became difficult to read due to:

  • Thermal variations (note the 47°C operating temperature)
  • Minor mechanical variations in head alignment
  • Electrical noise in the read channel

For developers building storage monitoring systems:

// Python example for tracking sector changes
import subprocess
import re

def check_pending_sectors(device):
    output = subprocess.check_output(['smartctl', '-A', device]).decode()
    pending = re.search(r'197 Current_Pending_Sector.*?(\d+)', output)
    uncorrect = re.search(r'198 Offline_Uncorrectable.*?(\d+)', output)
    return (int(pending.group(1)), int(uncorrect.group(1))) if pending and uncorrect else (0, 0)

Key monitoring parameters:

  • Track both absolute counts and rate of change
  • Alert on sustained increases (>24 hours)
  • Monitor temperature correlation

While the drive temporarily recovered, the eventual failure pattern confirmed this was indeed early warning of:

  1. Media degradation beginning in marginal sectors
  2. Progressive failure of the drive's error correction capabilities
  3. Eventual reallocation of sectors (which occurred months later)

For production systems, I now recommend proactive replacement when observing this pattern, as it often precedes complete failure within 3-6 months.